HIV-1 CRF 02 AG polymerase genes in Southern Ghana are mosaics of different 02 AG strains and the protease gene cannot infer subtypes.
Identifieur interne : 000A27 ( Main/Exploration ); précédent : 000A26; suivant : 000A28HIV-1 CRF 02 AG polymerase genes in Southern Ghana are mosaics of different 02 AG strains and the protease gene cannot infer subtypes.
Auteurs : Kwamena W. Sagoe [Ghana] ; Magda Dwidar ; Theophilus K. Adiku ; Max Q. ArensSource :
- Virology journal [ 1743-422X ] ; 2009.
Descripteurs français
- KwdFr :
- Analyse de séquence d'ADN, Données de séquences moléculaires, Ghana, Gènes pol (génétique), Humains, Infections à VIH (virologie), Phylogénie, Protéase du VIH (génétique), Recombinaison génétique, Transcriptase inverse du VIH (génétique), VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (), VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (enzymologie), VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (génétique).
- MESH :
- enzymologie : VIH-1 (Virus de l'Immunodéficience Humaine de type 1).
- génétique : Gènes pol, Protéase du VIH, Transcriptase inverse du VIH, VIH-1 (Virus de l'Immunodéficience Humaine de type 1).
- virologie : Infections à VIH.
- Analyse de séquence d'ADN, Données de séquences moléculaires, Ghana, Humains, Phylogénie, Recombinaison génétique, VIH-1 (Virus de l'Immunodéficience Humaine de type 1).
- Wicri :
- geographic : Ghana.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : HIV Protease, HIV Reverse Transcriptase.
- geographic : Ghana.
- classification : HIV-1.
- enzymology : HIV-1.
- genetics : Genes, pol, HIV-1.
- virology : HIV Infections.
- Humans, Molecular Sequence Data, Phylogeny, Recombination, Genetic, Sequence Analysis, DNA.
Abstract
Little is known about the detailed phylogeny relationships of CRF 02_AG HIV-1 polymerase genes in Ghana. The use of the protease gene of HIV-1 for subtyping has shown conflicting results.
DOI: 10.1186/1743-422X-6-27
PubMed: 19245688
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 000133
- to stream PubMed, to step Curation: 000133
- to stream PubMed, to step Checkpoint: 000133
- to stream Ncbi, to step Merge: 000319
- to stream Ncbi, to step Curation: 000319
- to stream Ncbi, to step Checkpoint: 000319
- to stream Main, to step Merge: 000A37
- to stream Main, to step Curation: 000A27
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">HIV-1 CRF 02 AG polymerase genes in Southern Ghana are mosaics of different 02 AG strains and the protease gene cannot infer subtypes.</title>
<author><name sortKey="Sagoe, Kwamena W" sort="Sagoe, Kwamena W" uniqKey="Sagoe K" first="Kwamena W" last="Sagoe">Kwamena W. Sagoe</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Microbiology, University of Ghana Medical School, Accra, Ghana. kwcsagoe@chs.edu.gh</nlm:affiliation>
<country xml:lang="fr">Ghana</country>
<wicri:regionArea>Department of Microbiology, University of Ghana Medical School, Accra</wicri:regionArea>
<placeName><settlement type="city">Accra</settlement>
<region nuts="2">Région du Grand Accra</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Dwidar, Magda" sort="Dwidar, Magda" uniqKey="Dwidar M" first="Magda" last="Dwidar">Magda Dwidar</name>
</author>
<author><name sortKey="Adiku, Theophilus K" sort="Adiku, Theophilus K" uniqKey="Adiku T" first="Theophilus K" last="Adiku">Theophilus K. Adiku</name>
</author>
<author><name sortKey="Arens, Max Q" sort="Arens, Max Q" uniqKey="Arens M" first="Max Q" last="Arens">Max Q. Arens</name>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2009">2009</date>
<idno type="RBID">pubmed:19245688</idno>
<idno type="pmid">19245688</idno>
<idno type="doi">10.1186/1743-422X-6-27</idno>
<idno type="wicri:Area/PubMed/Corpus">000133</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000133</idno>
<idno type="wicri:Area/PubMed/Curation">000133</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000133</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000133</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000133</idno>
<idno type="wicri:Area/Ncbi/Merge">000319</idno>
<idno type="wicri:Area/Ncbi/Curation">000319</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000319</idno>
<idno type="wicri:Area/Main/Merge">000A37</idno>
<idno type="wicri:Area/Main/Curation">000A27</idno>
<idno type="wicri:Area/Main/Exploration">000A27</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">HIV-1 CRF 02 AG polymerase genes in Southern Ghana are mosaics of different 02 AG strains and the protease gene cannot infer subtypes.</title>
<author><name sortKey="Sagoe, Kwamena W" sort="Sagoe, Kwamena W" uniqKey="Sagoe K" first="Kwamena W" last="Sagoe">Kwamena W. Sagoe</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Microbiology, University of Ghana Medical School, Accra, Ghana. kwcsagoe@chs.edu.gh</nlm:affiliation>
<country xml:lang="fr">Ghana</country>
<wicri:regionArea>Department of Microbiology, University of Ghana Medical School, Accra</wicri:regionArea>
<placeName><settlement type="city">Accra</settlement>
<region nuts="2">Région du Grand Accra</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Dwidar, Magda" sort="Dwidar, Magda" uniqKey="Dwidar M" first="Magda" last="Dwidar">Magda Dwidar</name>
</author>
<author><name sortKey="Adiku, Theophilus K" sort="Adiku, Theophilus K" uniqKey="Adiku T" first="Theophilus K" last="Adiku">Theophilus K. Adiku</name>
</author>
<author><name sortKey="Arens, Max Q" sort="Arens, Max Q" uniqKey="Arens M" first="Max Q" last="Arens">Max Q. Arens</name>
</author>
</analytic>
<series><title level="j">Virology journal</title>
<idno type="eISSN">1743-422X</idno>
<imprint><date when="2009" type="published">2009</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Genes, pol (genetics)</term>
<term>Ghana</term>
<term>HIV Infections (virology)</term>
<term>HIV Protease (genetics)</term>
<term>HIV Reverse Transcriptase (genetics)</term>
<term>HIV-1 (classification)</term>
<term>HIV-1 (enzymology)</term>
<term>HIV-1 (genetics)</term>
<term>Humans</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Recombination, Genetic</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Données de séquences moléculaires</term>
<term>Ghana</term>
<term>Gènes pol (génétique)</term>
<term>Humains</term>
<term>Infections à VIH (virologie)</term>
<term>Phylogénie</term>
<term>Protéase du VIH (génétique)</term>
<term>Recombinaison génétique</term>
<term>Transcriptase inverse du VIH (génétique)</term>
<term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1) ()</term>
<term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (enzymologie)</term>
<term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (génétique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>HIV Protease</term>
<term>HIV Reverse Transcriptase</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Ghana</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>HIV-1</term>
</keywords>
<keywords scheme="MESH" qualifier="enzymologie" xml:lang="fr"><term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1)</term>
</keywords>
<keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>HIV-1</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genes, pol</term>
<term>HIV-1</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Gènes pol</term>
<term>Protéase du VIH</term>
<term>Transcriptase inverse du VIH</term>
<term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1)</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à VIH</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>HIV Infections</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Humans</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Recombination, Genetic</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Données de séquences moléculaires</term>
<term>Ghana</term>
<term>Humains</term>
<term>Phylogénie</term>
<term>Recombinaison génétique</term>
<term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1)</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Ghana</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Little is known about the detailed phylogeny relationships of CRF 02_AG HIV-1 polymerase genes in Ghana. The use of the protease gene of HIV-1 for subtyping has shown conflicting results.</div>
</front>
</TEI>
<affiliations><list><country><li>Ghana</li>
</country>
<region><li>Région du Grand Accra</li>
</region>
<settlement><li>Accra</li>
</settlement>
</list>
<tree><noCountry><name sortKey="Adiku, Theophilus K" sort="Adiku, Theophilus K" uniqKey="Adiku T" first="Theophilus K" last="Adiku">Theophilus K. Adiku</name>
<name sortKey="Arens, Max Q" sort="Arens, Max Q" uniqKey="Arens M" first="Max Q" last="Arens">Max Q. Arens</name>
<name sortKey="Dwidar, Magda" sort="Dwidar, Magda" uniqKey="Dwidar M" first="Magda" last="Dwidar">Magda Dwidar</name>
</noCountry>
<country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Sagoe, Kwamena W" sort="Sagoe, Kwamena W" uniqKey="Sagoe K" first="Kwamena W" last="Sagoe">Kwamena W. Sagoe</name>
</region>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/SidaGhanaV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000A27 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000A27 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Wicri/Sante |area= SidaGhanaV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:19245688 |texte= HIV-1 CRF 02 AG polymerase genes in Southern Ghana are mosaics of different 02 AG strains and the protease gene cannot infer subtypes. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:19245688" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a SidaGhanaV1
This area was generated with Dilib version V0.6.31. |